Publications

Work in progress…

Leduc, A., Pruvost, O., Vernière, C., Lefeuvre, P., Boyer, C., Vital, K., Guérin, F., Derso, E. & V. Ravigné. Demo-genetic characteristics of an invasive population of a monomorphic pathogen Xanthomonas citri pv. citri responsible for an Asiatic citrus canker outbreak in
Ethiopia. In preparation

Robert, S., Vitalis, R. , Rieux, A., Zapater, M.-F., Carlier, J. & V. Ravigné. A single introduction and severe genetic bottlenecks characterise the propagation of a fungal banana pathogen across Africa. In preparation

Published

To see my papers by topic, clic on the corresponding topic : Ecological specialization, Biological invasions, Population genetics, Epidemiology and adaptation in fungal plant pathogens

2019

47. Olazcuaga, L., Rode, N. O., Foucaud, J., Facon, B., Ravigné, V., Ausset, A., Leménager, N., Loiseau, A., Gautier, M., Estoup, A. & R. A. Hufbauer. Oviposition preference and larval performance of spotted-wing drosophila (Drosophila suzukii): effects of fruit identity and composition. In revision in Environmental Entomology.

46. Pirog, A., Jaquemet, S., Ravigné, V., Cliff, G., Clua, E., Holmes, B. J., Hussey, N. E., Nevill, J. E. G., Temple, A. J., Vigliola, L. & H. Magalon. 2019. Genetic population structure and demography of an apex predator, the tiger shark Galeocerdo cuvier. Accepted in Ecology & Evolution.

45. Pruvost, O., Boyer, K., Ravigné, V., Richard, D. & C. Vernière. 2019. Deciphering how plant pathogenic bacteria disperse and meet: molecular epidemiology of Xanthomonas citri pv. citri at microgeographic scales in a tropical area of Asiatic citrus canker endemicity. Early view in Evolutionary Applications.

2018

44. Froissart, R.*, Gallet, R.* & V. Ravigné. 2018. Experimental demonstration of the impact of hard and soft selection regimes on polymorphism maintenance in spatially heterogeneous environments. Evolution 72(8): 1677-1688. *Equal contributions

Earlier version deposited in Biorxiv PDF. Recommended by S. Bedhomme in Peer Community in Evolutionary biology.

2017

43. Charlery de la Masselière, M., Ravigné, V., Facon, B., Lefeuvre, P., Massol, F., Quilici, S. & P.-F. Duyck. Changes in phytophagous insect host ranges following the invasion of their community: Long-term data for fruit flies. Ecology & Evolution 7: 5181-5190.

42. Kamenova, S., Bartley, T., Bohan, D., Boutain, J. R., Colautti, R. I., Domaizon, I., Fontaine, C., Lemainque, A., LeViol, I., Mollot, G., Perga, M.-E., Ravigné, V. & François Massol. 2017. Invasions toolkit: current methods for tracking the spread and impact of invasive species. Advances in Ecological Research.  Networks of Invasion: A Synthesis of Concepts. Bohan David A. (ed.), Dumbrell Alex J. (ed.), Massol François (ed.). Londres : Academic Press, p. 85-182.

41. Landry, C., Bonnot, F., Ravigné, V., Carlier, J., Rengifod, D., Vaillant, J. & C. Abadie. A foliar disease simulation model to assist the design of new control methods against black leaf streak disease of banana. Ecological Modelling 359: 383-397.

40. Ravigné, V., Lemesle, V., Walter, A., Mailleret, L. & F. M.  Hamelin. 2017. Mate Limitation in Fungal Plant Parasites Can Lead to Cyclic Epidemics in Perennial Host Populations. Bulletin of Mathematical Biology 79 (3): 430-447

39. Richard, D., Ravigné, V., Rieux, A., Facon, B., Boyer, C., Boyer, K., Grygiel, P., Javegny, S., Terville, M., Canteros, B. I., Robène, I., Vernière, C., Chabirand, A., Pruvost, O. & P. Lefeuvre.2017. Adaptation of genetically monomorphic bacteria: copper resistance evolution through multiple horizontal gene transfers of complex and versatile mobile genetic elements. Molecular Ecology  26: 2131-2149.

38. Walker, A.-S., Rieux, A. Ravigné, V. & E. Fournier. 2017. Fungal adaptation to contemporary fungicide applications: the case of Botrytis cinerea populations from Champagne vineyards (France). Molecular Ecology 26: 1919-1935.

2016

37. De Bruyn, A., Harimalala, M. A., Zinga, I., Mabvakure, B., Hoareau, M., Ravigné, V., Walters, M., Reynaud, B., Varsani, A., Harkins, G., W., Martin, D. P., Lett, J.-M., Lefeuvre, P. 2016. Divergent evolutionary and epidemiological dynamics of cassava mosaic geminiviruses in Madagascar. BMC Evolutionary Biology 16(182) PDF

36. Estoup, A. Ravigné, V., Hufbauer, R., Vitalis, R., Gauthier, M. & B. Facon. Is there a genetic paradox of invasion? Annual Review of Ecology, Evolution, and Systematics. 47:51–72

35. Gallet, R., Fontaine, C., Bonnot, F., Milazzo, J., Tertois, C., Adreit, H., Ravigné, V., Fournier, E. & D. Tharreau. Evolution of compatibility range in the rice-Magnaporthe oryzae system: an uneven distribution of R genes between rice subspecies. Phytopathology 106:348-354.

34. Hafsi A., Facon B., Ravigné V., Chiroleu F., Quilici S., Chermiti B. & P.-F. Duyck. 2016. Host plant range of a fruit fly community (Diptera: Tephritidae): does fruit composition influence larval performance? BMC Ecology 16:1-14. PDF

33. Hamelin, F. M., Castella, F., Doli, V., Ravigné, V. & M. A. Lewis. Mate finding, sexual spore production, and the spread of fungal plant parasites. Bulletin of Mathematical Biology 78:695-712.

2015

32. Leduc, A., Traoré, Y., Boyer, K., Magne, M., Grygiel, P., Juhasz, C. C., Guérin, F., Wonni, I., Vernière*, C., Ravigné*, V. & O. Pruvost*. 2015. Bridgehead invasion of a monomorphic plant pathogenic bacterium: Xanthomonas citri pv. citri, an emerging citrus pathogen in Mali and Burkina Faso. Environmental Microbiology 17:4429-4442 *Equal contributions

31. Robert, S., Zapater, M.-F., Abadie, C., Carlier, J. & V. Ravigné. 2015. Multiple introductions and admixture at the origin of the continental spread of the fungal banana pathogen Mycosphaerella fijiensis in Latin America: a statistical test using Approximate Bayesian Computation. Revue d’Ecologie (Terre et Vie) 70 (suppt 12 «Espèces invasives »):127

30. Suffert, F., Ravigné, V., & I. Sache. 2015. Seasonal changes drive short-term selection for fitness traits in the wheat pathogen Zymoseptoria tritici. Applied and Environmental Microbiology 81:6367-6379 PDF

29. Tayeh, A., Hufbauer, R. A., Estoup, A., Ravigné, V., Frachon, L. & B. Facon. 2015. Biological invasion and biological control select for different life histories. Nature Communications 6:7268 PDF

2014

28. Bazin, E., Mathé-Hubert, H., Facon, B., Carlier, J. & V. Ravigné. 2014.  The effect of mating system on invasiveness: some genetic load may be advantageous when invading new environments. Biological Invasions 16:875-886

27. Castel, M. K., Mailleret. L., Andrivon, D., Ravigné, V. & F. Hamelin. 2014. Allee effects and the evolution of polymorphism in cyclical parthenogens. The American Naturalist 183:E75–E88

26. Gallet, R, Bonnot, F, Milazzo, J., Tertois, C., Adreit, H., Ravigné, V., Tharreau, D., & E. Fournier. 2014. The variety mixture strategy assessed in a GXG experiment with rice and the blast fungus Magnaporthe oryzae. Frontiers in Genetics 4:312 PDF

25. Perrier, C., Le Gentil, J., Ravigné, V., Gaudin, P. & J.-C. Salvado. 2014. Genetic origin and diversity among Atlantic salmon recolonizing upstream areas of a large South European river following connectivity restoration and stocking. Conservation Genetics 15:1095-1109

24. Pruvost, O., Magne, M., Boyer, K., Leduc, A., Tourterel, C., Drevet, C., Ravigné, V., Gagnevin, L., Guérin, F., Chiroleu, F., Koebnik, R., Verdier, V. & C. Vernière. 2014. A MLVA genotyping scheme for global surveillance of the citrus pathogen Xanthomonas citri pv. citri suggests a worldwide geographical expansion of a single genetic lineage. PLoS ONE 9:e98129 PDF

23. Rieux, A., Soubeyrand, S., Bonnot, F., Klein, E., Ngando, J. E., Mehl, A., Ravigné, V., Carlier, J. & L. de Lapeyre de Bellaire. 2014. Long-distance wind-dispersal of spores in Mycosphaerella fijiensis: Estimation of anisotropic dispersal kernels from an extensive field experiment. PLoS ONE 9:e103225 PDF

22. Vernière, C., Bui Thi Ngoc, L., Jarne, P., Ravigné, V., Guérin, F., Gagnevin, L., Le Mai, N., Chau, N.M. & O. Pruvost. 2014. Highly polymorphic markers reveal the establishment of an invasive lineage of the citrus bacterial pathogen Xanthomonas citri pv. citri in its area of origin. Environmental Microbiology 16:2226-2237

2013

21. Bermond, G., Blin, A., Vercken, E., Ravigné, V., Rieux, A., Mallez, S. Morel-Journel, T. & T. Guillemaud. Estimation of the dispersal of a major pest of maize by cline analysis of a temporary contact zone between two invasive outbreaks. Molecular Ecology 22: 5368-5381

20. Rieux, A., Lenormand, T., Carlier, J., de Lapeyre de Bellaire, L. & V. Ravigné. 2013. Using neutral cline decay to estimate contemporary dispersal: a generic tool and its application to a major crop pathogen. Ecology Letters 16: 721-730

19. Tayeh, A., Estoup, A. Hufbauer, R., Ravigné, V., Goryacheva, I., Zakharov, I., Lombaert, E., & B. Facon. 2013. Investigating the genetic load of an emblematic invasive species: The case of the invasive harlequin ladybird Harmonia axyridis. Ecology and Evolution 3:864-871 PDF

2012

18. Barrès, B., Carlier, J., Seguin, M., Fenouillet, C., Cilas, C., & V. Ravigné. 2012. Understanding the recent colonization history of a plant pathogenic fungus using population genetic tools and Approximate Bayesian Computation. Heredity 109:269-279

17. Dutech, C., Barrès, B., Bridier, J., Robin, C., Milgroom, M. & V. Ravigné. 2012. The Chestnut Blight Fungus World Tour: successive introduction events from diverse origins in an invasive plant fungal pathogen. Molecular Ecology 21:3931-3946

16. Hufbauer, R. A., Facon, B., Ravigné, V., Turgeon, J., Foucaud, J., Lee, C. E., Rey, O., & A. Estoup. 2012. Anthropogenically-Induced Adaptation to Invade (AIAI): Contemporary adaptation to human-altered habitats within the native range can promote invasions. Evolutionary Applications 5: 89-101 PDF

15. Rieux, A., de Lapeyre de Bellaire, L., Zapater, M.-F., Ravigné, V., and J. Carlier. 2012. Recent range expansion and agricultural landscape heterogeneity have only minimal effect on the spatial genetic structure of the plant pathogenic fungus Mycosphaerella fijiensis. Heredity 110:29-38

14. Robert, S., Ravigné, V., Zapater, M.-F., Abadie, C. & J. Carlier. 2012. Contrasting introduction scenarios among continents in the worldwide invasion of the banana fungal pathogen Mycosphaerella fijiensis. Molecular Ecology 21(5): 1098-1114

13. Saleh, D., Xu, P., Shen, Y., Li, C., Adreit, H., Milazzo, J., Ravigné, V., Bazin, E., Nottéghem, J.-L., Fournier, E. & D. Tharreau. 2012. Sex at the origin: an Asian population of the rice blast fungus Magnaporthe oryzae reproduces sexually. Molecular Ecology 21:1330-1344

2011

12. Rieux, A., Halkett, F., de Lapeyre de Bellaire, L., Zapater, M.-F., Rousset, F., Ravigné, V. & J. Carlier. 2011. Inferences on pathogenic fungus population structures from microsatellite data: an original landscape genetics approach reveals traces of historical events. Molecular Ecology 20: 1661-1674

2010

11. Cornuet, J.-M., Ravigné, V. & A. Estoup. 2010. Inference on population history and model checking using DNA sequence and microsatellite data with the software DIYABC(v1.0). BMC Bioinformatics 11: 401 PDF

2009

10. Ravigné, V., Dieckmann, U., & I. Olivieri. 2009. Live where you thrive: Joint evolution of habitat choice and local adaptation facilitates specialization and promotes diversity. The American Naturalist 174 (4): E141-E169

9. Pariaud, B., Ravigné V., Halkett F., Goyeau H., Carlier J., Lannou C. 2009. Aggressiveness and its role in the adaptation of fungal plant pathogens. Plant Pathology 58 (3): 409-424

2008

8. Labonne, L., V. Ravigné, B. Parisi and C. Gaucherel. 2008. Linking dendritic network structures to population demogenetics: The downside of connectivity. Oikos 117:1479-1490

7. Lehmann, L., V. Ravigné, and L. Keller. 2008. Population viscosity can promote the evolution of altruistic sterile helpers and eusociality. Proceedings of the Royal Society B-Biological Sciences 275:1887-1895

6. Facon, B., V. Ravigné, and J. Goudet. 2008. Gender-role alternation in the simultaneously hermaphroditic freshwater snail Physa acuta: not with the same partner. Behavioral Ecology and Sociobiology 62:713-720

2007

5. Facon, B., V. Ravigné, L. Sauteur, and J. Goudet. 2007. Effect of mating history on gender preference inthe hermaphroditic snail Physa acuta. Animal Behaviour 74:1455-1461

2002-2006

4. Facon, B., V. Ravigné, and J. Goudet. 2006. Experimental evidence of inbreeding avoidance in the hermaphroditic snail Physa acuta. Evolutionary Ecology 20:395-406

3. Ravigné, V. 2006. Selective interactions between short-distance pollen and seed dispersal in self-compatible species (vol 60, pg 2260, 2006). Evolution 60:2666-2666

3bis. Ravigné, V., I. Olivieri, S. C. Gonzalez-Martinez & F. Rousset. 2006. Selective interactions between short-distance pollen and seed dispersal in self-compatible species. Evolution 60:2257-2271

2. Ravigné, V., I. Olivieri & U. Dieckmann. 2004. Implications of habitat choice for protected polymorphisms. Evolutionary Ecology Research 6:125-145

1. Kirkpatrick,M. & V. Ravigné. 2002. Speciation by natural and sexual selection: Models and experiments. The American Naturalist 159:S22-S35

Book chapters

1. Barberousse A., Bierne N., Britton-Davidian J., Capy P., Desdevises Y., Giraud, T., Jousselin E., Moulia C., Ravigné V., Samadi S., Smadja C. 2010. La spéciation. Edited by V. Ravigné In: Thomas F., Lefèvre T., Raymond M., Biologie Evolutive : De Boeck

Publicités

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